C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446082 RP3-347M6.1-001 ENSG00000223819 9606 - X:100800303-100800784 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverLungOvaryTestisENST00000446082
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Lung Ovary Testis
ENST00000446082 0.346±0.00 0.417±0.00 0.063±0.00 0.269±0.00 0.029±0.00 0.078±0.00 0.027±0.00 0.347±0.14 0.190±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BC CIL_0007BC_0001 CGP X:100674491-100840932

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 532
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 521
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 510
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 492
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 492
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 488
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 481
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 468
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 449
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000121648 Gm6067-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0 207
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 1e-38 163

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