C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446003 ARHGAP21-003 ENSG00000107863 9606 - 10:24596822-24723240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungMuscleOvaryENST00000446003
Transcript ID Brain Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000446003 15.811±0.00 5.010±0.00 4.488±0.00 1.341±0.00 7.657±0.00 8.785±0.00 2.464±0.00 4.419±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002D1 CIL_0002D1_0001 CGP 10:23694746-24723668
CIL_00077X CIL_00077X_0002 CGP 10:24583609-24952604

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114594 Arhgap21-001 protein_coding Mus_musculus 0 3504
ENSMUST00000154230 Arhgap21-201 protein_coding Mus_musculus 0 3432
ENSMUST00000141298 Arhgap21-012 protein_coding Mus_musculus 0 3432
ENSMUST00000174584 Arhgap21-005 nonsense_mediated_decay Mus_musculus 0 2874
ENSMUST00000173194 Arhgap21-013 protein_coding Mus_musculus 0 2833
ENSMUST00000173784 Arhgap21-018 protein_coding Mus_musculus 0 893
ENSMUST00000140230 Arhgap21-004 protein_coding Mus_musculus 0 422
ENSMUST00000156142 Arhgap21-006 processed_transcript Mus_musculus 0 361
ENSMUST00000154657 Arhgap21-007 retained_intron Mus_musculus 0 285
ENSMUST00000125783 Arhgap21-015 protein_coding Mus_musculus 2e-29 135

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