C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441511 AC012513.4-001 ENSG00000236478 9606 - 2:216174896-216176032 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyOvaryTestisENST00000441511
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Ovary Testis
ENST00000441511 0.010±0.00 0.224±0.00 0.040±0.00 0.106±0.00 0.039±0.00 0.067±0.06 0.111±0.04 0.070±0.00 0.029±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ME CIL_0005ME_0001 CGP 2:216081866-216206303
CIL_0000AO CIL_0000AO_0002 CGP 2:216107464-216372027

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090792 Hnrnpa3-201 protein_coding Mus_musculus 0 1077
ENSMUST00000111964 Hnrnpa3-002 protein_coding Mus_musculus 0 1077
ENSMUST00000117582 Gm5940-001 processed_pseudogene Mus_musculus 0 1050
ENSMUST00000091130 Gm5641-201 protein_coding Mus_musculus 0 1046
ENSMUST00000164947 Hnrnpa3-202 protein_coding Mus_musculus 0 1046
ENSMUST00000111962 Hnrnpa3-001 protein_coding Mus_musculus 0 1046
ENSMUST00000177820 Gm9242-201 protein_coding Mus_musculus 0 1040
ENSMUST00000168178 Gm6254-001 processed_pseudogene Mus_musculus 0 1038
ENSMUST00000121942 Gm6161-001 processed_pseudogene Mus_musculus 0 1029
ENSMUST00000161973 Gm6397-001 processed_pseudogene Mus_musculus 0 1011
ENSMUST00000120017 Gm12960-001 processed_pseudogene Mus_musculus 0 1007
ENSMUST00000125165 Gm11847-001 processed_pseudogene Mus_musculus 0 992
ENSMUST00000119652 Gm11991-001 processed_pseudogene Mus_musculus 0 990
ENSMUST00000117287 Gm14398-001 processed_pseudogene Mus_musculus 0 985
ENSMUST00000071732 Gm6793-201 protein_coding Mus_musculus 0 946
ENSMUST00000172004 Gm6153-001 processed_pseudogene Mus_musculus 0 900
ENSMUST00000119643 Gm6758-001 processed_pseudogene Mus_musculus 0 894
ENSMUST00000119775 Gm6506-001 processed_pseudogene Mus_musculus 0 885
ENSMUST00000122378 Gm14730-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000119765 Gm9431-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000120104 Gm12129-001 processed_pseudogene Mus_musculus 0 839
ENSMUST00000032395 Gm7399-001 processed_pseudogene Mus_musculus 0 782
ENSMUST00000166043 Gm17082-001 processed_pseudogene Mus_musculus 0 745
ENSMUST00000191574 RP24-177N20.1-001 processed_pseudogene Mus_musculus 0 728
ENSMUST00000089593 Gm7551-201 processed_pseudogene Mus_musculus 0 717
ENSMUST00000111961 Hnrnpa3-003 protein_coding Mus_musculus 0 715
ENSMUST00000073014 Gm8991-201 protein_coding Mus_musculus 0 617
ENSMUST00000120507 Gm12961-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000185178 Gm17190-002 protein_coding Mus_musculus 0 592
ENSMUST00000141974 Hnrnpa3-004 protein_coding Mus_musculus 0 586
ENSMUST00000184369 Gm17190-001 translated_processed_pseudogene Mus_musculus 0 562
ENSMUST00000189662 RP23-472J11.2-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000117756 Gm12194-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000119037 Gm12986-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000119442 Gm13369-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000121434 Gm14052-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000118087 Gm13351-001 processed_pseudogene Mus_musculus 2.99878e-43 180
ENSMUST00000167880 Sbf2-006 retained_intron Mus_musculus 2e-21 108

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