C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule associated monooxygenase, calponin and LIM domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441493 MICAL3-010 ENSG00000243156 9606 - 22:17787649-18024559 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000441493
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000441493 2.695±0.00 5.570±0.00 4.803±3.46 2.146±1.09 1.994±0.52 2.994±2.40 1.135±0.46 2.004±0.00 2.019±0.00 4.848±2.75 2.704±0.40 6.157±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Z7 CIL_0002Z7_0001 CGP 22:17734138-18024559
CIL_000240 CIL_000240_0001 CGP 22:17787649-18131138

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006887 IEA exocytosis
GO:0007010 IDA cytoskeleton organization
GO:0008270 IEA zinc ion binding
GO:0016709 ISS oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0030042 ISS actin filament depolymerization
GO:0055114 ISS oxidation-reduction process
GO:0071949 ISS FAD binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077159 Mical3-201 protein_coding Mus_musculus 0 3127
ENSMUST00000098457 Mical3-001 protein_coding Mus_musculus 0 2676
ENSMUST00000150503 Mical3-002 protein_coding Mus_musculus 0 1171
ENSDART00000028938 mical3a-001 protein_coding Danio_rerio 0 1168
ENSDART00000101026 mical3a-201 protein_coding Danio_rerio 0 1042
ENSDART00000147699 mical3b-001 protein_coding Danio_rerio 0 597
ENSMUST00000151602 Mical3-004 protein_coding Mus_musculus 0 566
ENSMUST00000140854 Mical3-006 retained_intron Mus_musculus 0 259

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