C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polycomb group ring finger 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000440452 PCGF3-002 ENSG00000185619 9606 + 4:705943-767864 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLungOvaryPlacentaENST00000440452
Transcript ID Adipose Adrenal Breast Colon Heart Lung Ovary Placenta
ENST00000440452 2.332±0.00 2.827±0.00 1.640±0.00 2.591±0.00 0.650±0.00 2.451±0.00 3.412±0.00 1.394±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CG CIL_0006CG_0001 CGP 4:681829-770640
CIL_0006LT CIL_0006LT_0001 CGP 4:705748-826198

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046975 Pcgf3-001 protein_coding Mus_musculus 0 830
ENSMUST00000138264 Pcgf3-003 processed_transcript Mus_musculus 2e-34 152
ENSMUST00000112597 Pcgf3-002 protein_coding Mus_musculus 2e-34 152
ENSDART00000123484 CABZ01086927.1-201 protein_coding Danio_rerio 2e-24 119

Loading