C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439829 AP002381.2-001 ENSG00000234751 9606 + 11:72940498-72941112 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000439829
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000439829 0.310±0.00 0.347±0.00 0.262±0.05 0.293±0.11 0.074±0.00 0.163±0.00 0.758±0.00 1.076±0.49 0.070±0.00 0.359±0.00 0.074±0.00 0.126±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105169 Gm4294-201 processed_pseudogene Mus_musculus 0 665
ENSMUST00000088480 Rpl15-ps3-001 processed_pseudogene Mus_musculus 0 660
ENSMUST00000112598 Rpl15-005 protein_coding Mus_musculus 0 660
ENSMUST00000079419 Rpl15-004 protein_coding Mus_musculus 0 660
ENSMUST00000100799 Rpl15-002 protein_coding Mus_musculus 0 660
ENSMUST00000080281 Rpl15-001 protein_coding Mus_musculus 0 660
ENSMUST00000081993 Gm10020-201 protein_coding Mus_musculus 0 654
ENSMUST00000119496 Gm10224-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000184247 Rpl15-ps2-001 processed_pseudogene Mus_musculus 0 645
ENSMUST00000097103 Gm8420-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000121621 Gm12726-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000120953 Gm13413-001 processed_pseudogene Mus_musculus 0 575
ENSMUST00000189382 RP23-277E3.1-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000121557 Gm13688-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000121890 Gm12035-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000073317 Gm5292-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000117231 Gm11191-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000118944 Gm15400-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000118237 Gm11500-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000120694 Rpl15-ps1-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000122372 Rpl15-ps4-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000132957 Gm15733-001 processed_pseudogene Mus_musculus 5.99756e-43 178
ENSMUST00000159873 Gm3329-001 processed_pseudogene Mus_musculus 5e-39 165

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