C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438325 RP13-93L13.2-001 ENSG00000231799 9606 + 9:89449558-89450754 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000438325
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000438325 0.264±0.00 0.322±0.00 0.360±0.00 0.129±0.08 0.035±0.01 0.030±0.00 0.240±0.00 0.416±0.00 0.057±0.00 0.048±0.00 0.065±0.01 0.045±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BJ CIL_0006BJ_0001 CGP 9:89360787-89606555
CIL_0008UF CIL_0008UF_0001 VISTA 9:89377569-89978974

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026425 Pa2g4-001 protein_coding Mus_musculus 0 1363
ENSMUST00000131728 Pa2g4-002 protein_coding Mus_musculus 0 643
ENSMUST00000147068 Pa2g4-003 retained_intron Mus_musculus 0 274

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