C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LSM3 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436601 LSM3P3-001 ENSG00000225787 9606 - 2:85102389-85102694 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLiverMuscleTestisENST00000436601
Transcript ID Adrenal Brain Breast Kidney Liver Muscle Testis
ENST00000436601 0.073±0.00 0.105±0.00 0.035±0.00 0.072±0.00 0.033±0.00 0.033±0.00 0.045±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AX CIL_0009AX_0001 VISTA 2:84977509-85579132

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040607 Lsm3-001 protein_coding Mus_musculus 0 337
ENSMUST00000126253 Lsm3-003 retained_intron Mus_musculus 0 294
ENSMUST00000123569 Lsm3-002 retained_intron Mus_musculus 3.99931e-42 174

Loading