C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430535 RP11-316K19.3-001 ENSG00000228728 9606 + X:150818753-150819246 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLiverLungMuscleOvaryPlacentaTestisENST00000430535
Transcript ID Adrenal Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000430535 0.028±0.00 0.621±0.00 0.131±0.00 0.672±0.49 0.890±0.00 0.135±0.01 0.195±0.00 0.026±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GF CIL_0007GF_0002 CGP X:150692971-150898816
CIL_0000UN CIL_0000UN_0002 CGP X:150766337-150990775

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 459
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 448
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 431
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 425
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 425
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 424
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 398
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 381
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 206
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 200
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 1.99993e-41 172
ENSMUST00000121356 Gm6079-001 processed_pseudogene Mus_musculus 1e-33 147
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 2e-31 139

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