C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde 3 phosphate dehydrogenase pseudogene 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429913 GAPDHP29-001 ENSG00000178596 9606 + 1:94302038-94303022 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderTestisENST00000429913
Transcript ID Bladder Testis
ENST00000429913 0.612±0.00 0.104±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DJ CIL_0009DJ_0001 VISTA 1:93815311-94417966
CIL_0009DI CIL_0009DI_0001 VISTA 1:93946469-94547443

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 697
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 697
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 691
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 691
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 691
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 691
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000119266 Gm12537-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000094175 Gm10291-201 processed_pseudogene Mus_musculus 0 680
ENSMUST00000183272 Gapdh-017 protein_coding Mus_musculus 0 676
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000120014 Gm13292-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 671
ENSMUST00000181493 Gm3200-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 669
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 669
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 669
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000091897 Gm5507-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000076317 Gm10293-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 654
ENSMUST00000182339 Gm4691-001 transcribed_processed_pseudogene Mus_musculus 0 652
ENSMUST00000182989 Gm4691-002 processed_transcript Mus_musculus 0 652
ENSMUST00000182522 Gm3534-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000117402 Gm7129-001 processed_pseudogene Mus_musculus 0 638
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000180415 Gm5523-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000182524 Gm2076-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000182720 Gm8349-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000183246 Gm2193-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000118655 Gm12182-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000182463 Gm3671-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000182798 Gm2445-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000117732 Gm11185-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000182565 Gm8825-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000087222 Gm3695-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000118182 Gm5944-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000117933 Gm15191-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000119418 Gm13464-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000182467 Gm6981-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000082064 Gm6316-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000182661 Gm7251-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000182336 Gm5652-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000118653 Gm8864-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000095320 Gm10313-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000183250 Gm8756-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000163135 Gm17068-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000182514 Gm9568-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000117318 Gm11453-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000182691 Gm7286-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000182995 Gm5335-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000182369 Gm6283-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000190835 RP24-347J6.3-001 processed_pseudogene Mus_musculus 0 544
ENSMUST00000118417 Gm14130-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000118789 Gm6322-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000181413 Gm6498-002 transcribed_processed_pseudogene Mus_musculus 0 532
ENSMUST00000081029 Gm6498-001 processed_transcript Mus_musculus 0 532
ENSMUST00000182724 Gm9149-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000064353 Gm8174-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000122068 Gm11960-001 transcribed_processed_pseudogene Mus_musculus 0 499
ENSMUST00000181063 Gm11960-002 processed_transcript Mus_musculus 0 499
ENSMUST00000121384 Gm12403-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000118700 Gm9164-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000118688 Gm8661-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000117854 Gm13296-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000182279 Gm4891-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000184810 Gm11214-001 translated_processed_pseudogene Mus_musculus 0 475
ENSMUST00000118177 Gm15294-001 translated_processed_pseudogene Mus_musculus 0 475
ENSMUST00000117317 Gm5187-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000118730 Gm13326-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000182237 Gm6946-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000183092 Gm5177-001 transcribed_processed_pseudogene Mus_musculus 0 464
ENSMUST00000183337 Gm5177-002 processed_transcript Mus_musculus 0 464
ENSMUST00000184486 Gm12117-001 translated_processed_pseudogene Mus_musculus 0 462
ENSMUST00000120199 Gm12969-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000183298 Gm8529-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000182375 Gm8492-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000182329 Gm7611-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000181445 Gm7741-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000181990 Gm4823-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000183020 Gm5710-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000153034 Gm10364-001 transcribed_processed_pseudogene Mus_musculus 0 425
ENSMUST00000076633 Gm10364-002 processed_transcript Mus_musculus 0 425
ENSMUST00000117214 Gm13870-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000182235 Gm7745-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000119554 Gm9439-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000182220 Gm7763-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000184252 Gm11214-002 protein_coding Mus_musculus 0 359
ENSMUST00000185454 RP24-255L24.1-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000183173 Gm9423-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000182616 Gm7572-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000182285 Gm9381-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000183067 Gm9358-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000118893 Gm15957-001 processed_pseudogene Mus_musculus 0 322
ENSMUST00000181115 Gm8357-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000118983 Gm11447-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000183831 Gm12117-002 protein_coding Mus_musculus 0 296
ENSMUST00000182394 Gm9522-001 processed_pseudogene Mus_musculus 0 276
ENSMUST00000182079 Gm15294-002 protein_coding Mus_musculus 0 244
ENSMUST00000182466 Gm17800-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000118210 Gm11550-001 processed_pseudogene Mus_musculus 0 191

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