C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 8B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419534 ARL8B-005 ENSG00000134108 9606 + 3:5122296-5179805 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungMuscleENST00000419534
Transcript ID Bladder Breast Colon Kidney Liver Lung Muscle
ENST00000419534 2.953±0.00 3.653±0.00 2.630±0.00 4.034±0.00 6.139±0.00 9.275±0.00 9.667±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050C CIL_00050C_0001 CGP 3:4979116-5180912
CIL_0005RI CIL_0005RI_0001 CGP 3:5122220-5219957

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 NAS:IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005525 IDA:IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IDA:IEA cytoplasm
GO:0005764 IEA lysosome
GO:0005768 IEA endosome
GO:0006184 NAS GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0007049 IEA cell cycle
GO:0007059 IMP chromosome segregation
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0019001 IEA guanyl nucleotide binding
GO:0019003 IDA GDP binding
GO:0030496 IDA midbody
GO:0031683 IEA G-protein beta/gamma-subunit complex binding
GO:0043014 IDA alpha-tubulin binding
GO:0048487 IDA beta-tubulin binding
GO:0051233 IDA spindle midzone
GO:0051301 IEA cell division
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032196 Arl8b-201 protein_coding Mus_musculus 0 702
ENSMUST00000027684 Arl8a-001 protein_coding Mus_musculus 0 270

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