C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nascent-polypeptide-associated complex alpha polypeptide pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419462 NACAP1-001 ENSG00000228224 9606 + 8:101361794-101372707 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000419462
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000419462 0.112±0.00 0.144±0.00 0.065±0.00 0.125±0.00 0.050±0.00 0.049±0.00 0.014±0.00 0.166±0.00 0.086±0.00 0.844±0.00 0.127±0.09 0.356±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088H CIL_00088H_0001 VISTA 8:100960984-101568585
CIL_000532 CIL_000532_0002 CGP 8:101177878-101669726

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073868 Naca-201 protein_coding Mus_musculus 0 830
ENSMUST00000052882 Gm6863-201 processed_pseudogene Mus_musculus 0 693
ENSMUST00000092048 Naca-202 protein_coding Mus_musculus 0 656
ENSMUST00000120435 Gm12482-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000189789 RP23-149C6.3-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 8e-16 90

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