C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417063 AC020983.5-001 ENSG00000243099 9606 + 7:138688980-138689522 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartMusclePlacentaENST00000417063
Transcript ID Bladder Brain Breast Colon Heart Muscle Placenta
ENST00000417063 0.111±0.00 0.026±0.00 0.050±0.00 0.047±0.00 0.045±0.00 0.045±0.00 0.114±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Q3 CIL_0002Q3_0001 CGP 7:138460334-138701352
CIL_0002QA CIL_0002QA_0001 CGP 7:138594285-138799560

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121001 Rpl17-ps5-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000118924 Rpl17-ps8-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000079716 Rpl17-201 protein_coding Mus_musculus 0 584
ENSMUST00000085340 Gm10268-201 processed_pseudogene Mus_musculus 0 573
ENSMUST00000119541 Rpl17-ps9-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000119383 Rpl17-ps10-001 processed_pseudogene Mus_musculus 0 568
ENSMUST00000120241 Rpl17-ps4-001 processed_pseudogene Mus_musculus 0 568
ENSMUST00000173076 Gm3617-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000119156 Rpl17-ps1-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000185778 RP24-178O17.1-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000189856 RP23-110B5.4-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000121305 Gm11472-001 processed_pseudogene Mus_musculus 0 484
ENSMUST00000164501 Gm17214-001 processed_pseudogene Mus_musculus 0 484
ENSMUST00000146593 Gm15843-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000119137 Gm15497-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000119012 Gm12380-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000187749 RP23-305F24.2-001 processed_pseudogene Mus_musculus 0 388

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