C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PARP1 binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412715 PARPBP-010 ENSG00000185480 9606 + 12:102123988-102197361 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverENST00000412715
Transcript ID Brain Liver
ENST00000412715 0.185±0.00 0.208±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006281 IEA DNA repair
GO:2000042 IMP negative regulation of double-strand break repair via homologous recombination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048518 Parpbp-001 protein_coding Mus_musculus 0 551
ENSMUST00000164121 Parpbp-004 protein_coding Mus_musculus 0 368
ENSMUST00000168163 Parpbp-002 protein_coding Mus_musculus 0 351
ENSMUST00000164803 Parpbp-003 protein_coding Mus_musculus 0 292
ENSMUST00000048621 Pmch-001 protein_coding Mus_musculus 0 261

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