C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 32
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412580 NPM1P32-001 ENSG00000213239 9606 - 2:121708512-121709115 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonMuscleOvaryTestisENST00000412580
Transcript ID Adipose Brain Breast Colon Muscle Ovary Testis
ENST00000412580 0.020±0.00 0.021±0.00 0.021±0.00 0.020±0.00 0.019±0.00 0.045±0.00 0.360±0.28

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164523 Gm5611-201 protein_coding Mus_musculus 0 641
ENSMUST00000118871 Gm15484-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000109354 Npm1-002 protein_coding Mus_musculus 0 601
ENSMUST00000075641 Npm1-001 protein_coding Mus_musculus 0 592
ENSMUST00000101375 Npm1-003 protein_coding Mus_musculus 0 590
ENSMUST00000120677 Gm12583-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000093201 Npm1-006 protein_coding Mus_musculus 0 390

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