C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412323 ATP5A1P2-001 ENSG00000227682 9606 + 2:155269633-155269887 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleTestisENST00000412323
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Testis
ENST00000412323 0.061±0.00 0.125±0.00 0.065±0.00 0.125±0.00 0.471±0.35 0.123±0.00 0.113±0.00 0.059±0.00 0.112±0.00 0.057±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000758 CIL_000758_0001 CGP 2:154698299-156342348
CIL_0008OW CIL_0008OW_0001 VISTA 2:155243279-155844975
CIL_0008TU CIL_0008TU_0001 VISTA 2:155246510-155847603

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114748 Atp5a1-002 protein_coding Mus_musculus 0 315
ENSMUST00000026495 Atp5a1-001 protein_coding Mus_musculus 0 315
ENSMUST00000135678 Atp5a1-003 nonsense_mediated_decay Mus_musculus 0 226

Loading