C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404701 RP1-319M7.2-001 ENSG00000217227 9606 + 6:38587323-38588529 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLungOvaryTestisENST00000404701
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Testis
ENST00000404701 0.020±0.00 0.385±0.00 0.020±0.00 0.083±0.07 0.139±0.00 0.009±0.00 0.117±0.10 0.333±0.00 0.009±0.00 0.035±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LF CIL_0004LF_0002 CGP 6:37819499-38640148
CIL_0008CK CIL_0008CK_0001 VISTA 6:38090914-38692308
CIL_0004LK CIL_0004LK_0002 CGP 6:38168451-38703141

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065515 Tfg-001 protein_coding Mus_musculus 0 1158
ENSMUST00000127994 Tfg-006 protein_coding Mus_musculus 0 652
ENSMUST00000121554 Tfg-005 protein_coding Mus_musculus 0 518
ENSMUST00000156522 Tfg-007 protein_coding Mus_musculus 0 492
ENSMUST00000136394 Tfg-004 protein_coding Mus_musculus 0 488
ENSMUST00000128551 Tfg-002 protein_coding Mus_musculus 0 381
ENSMUST00000141404 Tfg-003 protein_coding Mus_musculus 0 313

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