C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: visinin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404666 VSNL1-003 ENSG00000163032 9606 + 2:17539126-17655528 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000404666
Transcript ID Adipose Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000404666 0.044±0.00 88.864±0.00 0.682±0.00 0.233±0.00 0.283±0.00 0.534±0.00 0.026±0.01 5.513±5.22 3.837±3.22 0.725±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0019722 IEA calcium-mediated signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072299 Vsnl1-201 protein_coding Mus_musculus 0 946
ENSMUST00000106246 Hpcal4-002 protein_coding Mus_musculus 0 470
ENSMUST00000059667 Hpcal4-001 protein_coding Mus_musculus 0 470
ENSMUST00000152194 Hpcal4-005 protein_coding Mus_musculus 0 394

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