C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397103 FGFR1-011 ENSG00000077782 9606 - 8:38412934-38457503 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLungOvaryPlacentaTestisENST00000397103
Transcript ID Adrenal Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000397103 8.267±0.00 12.969±8.30 12.594±0.00 6.312±0.00 21.955±0.00 21.017±0.00 15.324±6.26 13.457±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NR CIL_0008NR_0001 VISTA 8:38140056-38746180
CIL_0008SM CIL_0008SM_0001 VISTA 8:38252496-38854674
CIL_0008H7 CIL_0008H7_0001 VISTA 8:38253282-38854976
CIL_0008D9 CIL_0008D9_0001 VISTA 8:38350004-38951124

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005007 IEA fibroblast growth factor-activated receptor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0008284 IEA positive regulation of cell proliferation
GO:0008543 IEA fibroblast growth factor receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0018108 IEA peptidyl-tyrosine phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178276 Fgfr1-201 protein_coding Mus_musculus 0 2968
ENSMUST00000167764 Fgfr1-005 protein_coding Mus_musculus 0 2968
ENSMUST00000179592 Fgfr1-202 protein_coding Mus_musculus 0 1803
ENSMUST00000126118 Fgfr1-011 retained_intron Mus_musculus 0 1803
ENSMUST00000119398 Fgfr1-003 protein_coding Mus_musculus 0 1803
ENSMUST00000117179 Fgfr1-002 protein_coding Mus_musculus 0 1803
ENSMUST00000084027 Fgfr1-001 protein_coding Mus_musculus 0 1803
ENSMUST00000120106 Fgfr1-015 retained_intron Mus_musculus 0 1530
ENSMUST00000138104 Fgfr1-007 processed_transcript Mus_musculus 0 952
ENSMUST00000138455 Fgfr1-008 retained_intron Mus_musculus 0 876
ENSMUST00000117691 Fgfr2-013 protein_coding Mus_musculus 0 859
ENSMUST00000120187 Fgfr2-003 protein_coding Mus_musculus 0 859
ENSMUST00000121080 Fgfr2-019 protein_coding Mus_musculus 0 839
ENSMUST00000118296 Fgfr2-018 protein_coding Mus_musculus 0 839
ENSMUST00000117858 Fgfr2-014 protein_coding Mus_musculus 0 839
ENSMUST00000117357 Fgfr2-016 protein_coding Mus_musculus 0 826
ENSMUST00000120141 Fgfr2-015 protein_coding Mus_musculus 0 826
ENSMUST00000117089 Fgfr2-012 protein_coding Mus_musculus 0 826
ENSMUST00000122448 Fgfr2-017 protein_coding Mus_musculus 0 806
ENSDART00000067689 fgfr1b-201 protein_coding Danio_rerio 0 780
ENSDART00000075259 fgfr1b-202 protein_coding Danio_rerio 0 763
ENSMUST00000121064 Fgfr2-008 protein_coding Mus_musculus 0 758
ENSMUST00000120715 Fgfr2-010 protein_coding Mus_musculus 0 682
ENSMUST00000117754 Fgfr2-009 protein_coding Mus_musculus 0 682
ENSMUST00000122054 Fgfr2-004 protein_coding Mus_musculus 0 682
ENSMUST00000153166 Fgfr2-001 nonsense_mediated_decay Mus_musculus 0 682
ENSMUST00000119260 Fgfr2-011 protein_coding Mus_musculus 0 649
ENSMUST00000117872 Fgfr2-002 protein_coding Mus_musculus 0 649
ENSMUST00000117073 Fgfr2-020 protein_coding Mus_musculus 0 630
ENSMUST00000145218 Fgfr1-009 retained_intron Mus_musculus 0 579
ENSDART00000125883 fgfr3-202 protein_coding Danio_rerio 0 481
ENSDART00000013534 fgfr3-201 protein_coding Danio_rerio 0 481
ENSMUST00000124096 Fgfr2-007 protein_coding Mus_musculus 0 357
ENSMUST00000129542 Fgfr2-025 retained_intron Mus_musculus 0 331
ENSMUST00000124228 Fgfr1-013 protein_coding Mus_musculus 0 202
ENSMUST00000155564 Fgfr1-012 protein_coding Mus_musculus 0 202

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