C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396057 FOXB1-001 ENSG00000171956 9606 + 15:60004222-60007441 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartOvaryPlacentaTestisENST00000396057
Transcript ID Brain Heart Ovary Placenta Testis
ENST00000396057 0.011±0.00 0.010±0.00 0.105±0.09 0.484±0.17 0.584±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LQ CIL_0007LQ_0001 UCNEbase 15:59905203-60532122

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001655 IEA urogenital system development
GO:0001756 ISS somitogenesis
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007412 ISS axon target recognition
GO:0007595 ISS lactation
GO:0008542 ISS visual learning
GO:0021510 IEA spinal cord development
GO:0021767 ISS mammillary body development
GO:0021794 IEA thalamus development
GO:0021855 ISS hypothalamus cell migration
GO:0022029 ISS telencephalon cell migration
GO:0030901 ISS midbrain development
GO:0033504 ISS floor plate development
GO:0043524 ISS negative regulation of neuron apoptotic process
GO:0043565 ISS:IEA sequence-specific DNA binding
GO:0061030 ISS epithelial cell differentiation involved in mammary gland alveolus development
GO:0061374 ISS mammillothalamic axonal tract development
GO:0061377 ISS mammary gland lobule development
GO:0061379 ISS inferior colliculus development
GO:0061381 ISS cell migration in diencephalon

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071281 Foxb1-201 protein_coding Mus_musculus 0 1664
ENSDART00000125036 foxb1a-001 protein_coding Danio_rerio 0 429
ENSDART00000128240 foxb1a-201 protein_coding Danio_rerio 0 427
ENSMUST00000072915 Foxb2-201 protein_coding Mus_musculus 0 420
ENSDART00000075721 foxb1b-001 protein_coding Danio_rerio 0 285
ENSDART00000139380 BX927082.2-201 pseudogene Danio_rerio 0 283
ENSDART00000054558 foxb2-201 protein_coding Danio_rerio 0 278
ENSDART00000141623 foxb2-001 protein_coding Danio_rerio 0 278
ENSMUST00000105098 Foxd1-001 protein_coding Mus_musculus 0 224
ENSMUST00000062292 Foxc1-001 protein_coding Mus_musculus 1.96182e-44 185
ENSMUST00000050940 Foxe3-001 protein_coding Mus_musculus 2e-34 152

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