C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box P2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393491 FOXP2-201 ENSG00000128573 9606 + 7:114414997-114693768 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastHeartKidneyLiverMuscleOvaryPlacentaENST00000393491
Transcript ID Adrenal Bladder Breast Heart Kidney Liver Muscle Ovary Placenta
ENST00000393491 0.071±0.00 0.326±0.00 0.572±0.00 0.056±0.02 0.283±0.00 0.595±0.47 0.626±0.00 0.310±0.18 0.114±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084L CIL_00084L_0001 VISTA 7:113618068-114219050
CIL_00090T CIL_00090T_0001 VISTA 7:113853490-114454507
CIL_000412 CIL_000412_0001 CGP 7:113876777-114693772
CIL_000411 CIL_000411_0001 CGP 7:114086327-115019916

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115477 Foxp2-201 protein_coding Mus_musculus 0 2758
ENSMUST00000031545 Foxp2-001 protein_coding Mus_musculus 0 2758
ENSMUST00000115469 Foxp2-017 protein_coding Mus_musculus 0 1799
ENSMUST00000151060 Foxp2-005 retained_intron Mus_musculus 0 1748
ENSMUST00000151301 Foxp2-019 protein_coding Mus_musculus 0 1554
ENSMUST00000131414 Foxp2-020 protein_coding Mus_musculus 0 1393
ENSMUST00000115474 Foxp2-006 protein_coding Mus_musculus 0 1391
ENSMUST00000115475 Foxp2-015 nonsense_mediated_decay Mus_musculus 0 1323
ENSMUST00000115472 Foxp2-007 protein_coding Mus_musculus 0 1221
ENSMUST00000140557 Foxp2-014 protein_coding Mus_musculus 0 994
ENSMUST00000118133 Foxp2-013 protein_coding Mus_musculus 0 857
ENSMUST00000137628 Foxp2-018 protein_coding Mus_musculus 0 662
ENSMUST00000138273 Foxp2-004 retained_intron Mus_musculus 0 446
ENSMUST00000128567 Foxp2-009 protein_coding Mus_musculus 0 442
ENSMUST00000115470 Foxp2-002 protein_coding Mus_musculus 0 309
ENSMUST00000152563 Foxp2-016 nonsense_mediated_decay Mus_musculus 0 283
ENSMUST00000154448 Foxp2-012 protein_coding Mus_musculus 0 217
ENSMUST00000159788 Foxp2-021 processed_transcript Mus_musculus 8e-31 141

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