C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393214 AC004386.4-001 ENSG00000213269 9606 - X:74376125-74376885 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000393214
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000393214 0.032±0.00 0.033±0.00 0.032±0.00 0.030±0.00 0.030±0.00 0.032±0.00 0.014±0.00 0.045±0.00 0.029±0.00 0.037±0.00 0.043±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006S1 CIL_0006S1_0001 CGP X:74304190-74533917

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074205 Rps6-ps1-201 processed_pseudogene Mus_musculus 0 549
ENSMUST00000118499 Rps6-ps4-001 processed_pseudogene Mus_musculus 0 544
ENSMUST00000102814 Rps6-001 protein_coding Mus_musculus 0 544
ENSMUST00000120762 Gm8172-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000100510 Gm16409-201 processed_pseudogene Mus_musculus 0 532
ENSMUST00000121853 Gm11263-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000118010 Rps6-ps3-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000122061 Gm14138-001 processed_pseudogene Mus_musculus 0 490
ENSMUST00000079841 Rps6-ps2-201 processed_pseudogene Mus_musculus 0 477
ENSMUST00000121487 Gm11604-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000118824 Gm12242-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000118220 Gm8145-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000118255 Gm14172-001 processed_pseudogene Mus_musculus 3e-32 143
ENSMUST00000118747 Gm15233-001 processed_pseudogene Mus_musculus 2e-29 134
ENSMUST00000165520 Gm9006-001 processed_pseudogene Mus_musculus 5e-20 102
ENSMUST00000117178 Gm14481-001 processed_pseudogene Mus_musculus 0.00000000004 73

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