C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: excision repair cross-complementation group 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000391944 ERCC2-201 ENSG00000104884 9606 - 19:45351391-45370587 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLungMuscleOvaryPlacentaTestisENST00000391944
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000391944 1.526±0.00 1.758±0.00 1.231±0.00 1.789±0.74 1.064±0.47 0.692±0.00 1.630±0.00 1.347±0.00 3.226±0.00 2.710±0.00 5.430±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0004003 IEA ATP-dependent DNA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006139 IEA nucleobase-containing compound metabolic process
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0016818 IEA hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0032508 IEA DNA duplex unwinding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000129249 Ercc2-004 protein_coding Mus_musculus 0 2584
ENSMUST00000108460 Ercc2-003 protein_coding Mus_musculus 0 2141
ENSMUST00000062831 Ercc2-001 protein_coding Mus_musculus 0 2141
ENSMUST00000108461 Ercc2-002 protein_coding Mus_musculus 0 1925
ENSMUST00000128167 Ercc2-007 processed_transcript Mus_musculus 0 800
ENSMUST00000135693 Ercc2-009 retained_intron Mus_musculus 0 544
ENSMUST00000127363 Ercc2-006 processed_transcript Mus_musculus 0 446
ENSMUST00000129291 Ercc2-008 retained_intron Mus_musculus 0 237

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