C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ZXD family zinc finger C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389709 ZXDC-001 ENSG00000070476 9606 - 3:126437601-126475919 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000389709
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000389709 2.601±0.00 3.071±0.00 2.379±0.00 0.934±0.00 0.304±0.00 3.657±2.34 2.898±0.00 1.985±0.00 5.083±4.45 4.321±2.20 1.424±0.36 4.189±1.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IMP sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0030275 IPI LRR domain binding
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0070742 IPI C2H2 zinc finger domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075117 Zxdc-001 protein_coding Mus_musculus 0 1893
ENSMUST00000045740 Zxdc-201 protein_coding Mus_musculus 0 1640
ENSMUST00000113539 Zxdc-003 protein_coding Mus_musculus 0 1640
ENSMUST00000117281 Zxda-001 unprocessed_pseudogene Mus_musculus 0 839
ENSMUST00000101388 Zxdb-001 protein_coding Mus_musculus 0 839
ENSMUST00000137483 Zxdc-002 retained_intron Mus_musculus 0 732

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