C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KIAA1109
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000388738 KIAA1109-201 ENSG00000138688 9606 + 4:122170603-122362758 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000388738
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000388738 1.124±0.00 2.324±0.00 2.268±1.17 2.393±1.27 0.890±0.00 0.797±0.08 1.684±1.45 1.535±0.95 1.687±0.97 0.770±0.09 0.912±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AC CIL_0007AC_0001 CGP 4:121879027-122362758
CIL_0007AD CIL_0007AD_0001 CGP 4:122152333-122429802

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001558 NAS regulation of cell growth
GO:0005515 IPI protein binding
GO:0005634 NAS nucleus
GO:0016020 NAS membrane
GO:0016021 IEA integral component of membrane
GO:0030856 NAS regulation of epithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057272 4932438A13Rik-201 protein_coding Mus_musculus 0 20240
ENSMUST00000152564 4932438A13Rik-001 protein_coding Mus_musculus 0 20240
ENSMUST00000141740 4932438A13Rik-009 protein_coding Mus_musculus 0 5550
ENSMUST00000123916 4932438A13Rik-011 retained_intron Mus_musculus 0 4970
ENSMUST00000152881 4932438A13Rik-008 nonsense_mediated_decay Mus_musculus 0 4427
ENSMUST00000138950 4932438A13Rik-002 protein_coding Mus_musculus 0 4409
ENSMUST00000146948 4932438A13Rik-006 protein_coding Mus_musculus 0 4409
ENSMUST00000108145 4932438A13Rik-017 retained_intron Mus_musculus 0 3629
ENSMUST00000128061 4932438A13Rik-005 nonsense_mediated_decay Mus_musculus 0 3029
ENSMUST00000129721 4932438A13Rik-013 retained_intron Mus_musculus 0 1210
ENSMUST00000136287 4932438A13Rik-012 retained_intron Mus_musculus 0 1166
ENSMUST00000148698 4932438A13Rik-004 retained_intron Mus_musculus 0 1138
ENSMUST00000139219 4932438A13Rik-015 retained_intron Mus_musculus 0 813
ENSMUST00000143675 4932438A13Rik-014 retained_intron Mus_musculus 0 760
ENSMUST00000138152 4932438A13Rik-003 protein_coding Mus_musculus 0 603
ENSMUST00000136746 4932438A13Rik-010 retained_intron Mus_musculus 0 514
ENSMUST00000140480 4932438A13Rik-007 retained_intron Mus_musculus 0 296
ENSDART00000134725 si:ch211-233a24.2-001 protein_coding Danio_rerio 3.99931e-42 180

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