C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA cross-link repair 1C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378289 DCLRE1C-008 ENSG00000152457 9606 - 10:14897359-14954432 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLiverLungMuscleOvaryENST00000378289
Transcript ID Colon Heart Liver Lung Muscle Ovary
ENST00000378289 0.931±0.00 0.214±0.00 0.125±0.00 0.861±0.00 0.108±0.00 2.276±1.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045V CIL_00045V_0002 CGP 10:14897359-14988050

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000014 IDA single-stranded DNA endodeoxyribonuclease activity
GO:0000737 IDA DNA catabolic process, endonucleolytic
GO:0005634 IEA nucleus
GO:0008409 IDA 5'-3' exonuclease activity
GO:0090305 IDA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100463 Dclre1c-201 protein_coding Mus_musculus 0 1147
ENSMUST00000102988 Dclre1c-003 protein_coding Mus_musculus 0 1147
ENSMUST00000061852 Dclre1c-001 protein_coding Mus_musculus 0 1147
ENSMUST00000131433 Dclre1c-004 retained_intron Mus_musculus 0 806
ENSMUST00000132565 Dclre1c-005 processed_transcript Mus_musculus 0 562
ENSMUST00000146027 Dclre1c-006 processed_transcript Mus_musculus 0 405
ENSMUST00000100458 Suv39h2-004 protein_coding Mus_musculus 0 231
ENSMUST00000127540 Suv39h2-003 nonsense_mediated_decay Mus_musculus 0 231
ENSMUST00000027956 Suv39h2-001 protein_coding Mus_musculus 0 231

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