C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA cross-link repair 1C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378278 DCLRE1C-009 ENSG00000152457 9606 - 10:14908171-14954048 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverLungPlacentaENST00000378278
Transcript ID Brain Breast Colon Liver Lung Placenta
ENST00000378278 0.438±0.00 1.365±0.00 1.752±0.00 1.584±0.00 0.644±0.00 0.848±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045V CIL_00045V_0002 CGP 10:14897359-14988050

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000014 IDA single-stranded DNA endodeoxyribonuclease activity
GO:0000723 IEA telomere maintenance
GO:0000737 IDA DNA catabolic process, endonucleolytic
GO:0005634 IEA nucleus
GO:0006302 IEA double-strand break repair
GO:0006310 IEA DNA recombination
GO:0008409 IDA 5'-3' exonuclease activity
GO:0010212 IEA response to ionizing radiation
GO:0030183 IEA B cell differentiation
GO:0033151 IEA V(D)J recombination
GO:0051276 IEA chromosome organization
GO:0090305 IDA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102988 Dclre1c-003 protein_coding Mus_musculus 0 1417
ENSMUST00000061852 Dclre1c-001 protein_coding Mus_musculus 0 1338
ENSMUST00000100463 Dclre1c-201 protein_coding Mus_musculus 0 1147
ENSMUST00000131433 Dclre1c-004 retained_intron Mus_musculus 0 806
ENSMUST00000132565 Dclre1c-005 processed_transcript Mus_musculus 0 562
ENSMUST00000146027 Dclre1c-006 processed_transcript Mus_musculus 0 405

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