C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: splA/ryanodine receptor domain and SOCS box containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377399 SPSB1-002 ENSG00000171621 9606 + 1:9355707-9367575 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverMuscleOvaryPlacentaTestisENST00000377399
Transcript ID Bladder Liver Muscle Ovary Placenta Testis
ENST00000377399 0.831±0.00 1.675±0.00 1.114±0.00 13.742±0.00 7.096±2.68 3.560±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VW CIL_0008VW_0001 VISTA 1:9071068-9672775

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105684 Spsb1-009 protein_coding Mus_musculus 0 1085
ENSMUST00000105685 Spsb1-002 protein_coding Mus_musculus 0 1072
ENSMUST00000038562 Spsb1-001 protein_coding Mus_musculus 0 1072
ENSMUST00000156897 Spsb1-003 protein_coding Mus_musculus 0 809
ENSMUST00000167342 Spsb1-010 protein_coding Mus_musculus 0 239
ENSMUST00000149360 Spsb1-006 protein_coding Mus_musculus 0 233

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