C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin B pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376781 UBBP2-001 ENSG00000228247 9606 - 1:217850403-217850633 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000376781
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000376781 0.080±0.00 1.286±0.00 0.644±0.00 0.631±0.00 0.413±0.00 0.610±0.00 0.346±0.00 0.525±0.00 0.670±0.00 0.148±0.00 3.293±0.00 0.846±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JY CIL_0007JY_0001 UCNEbase 1:215651193-218349979
CIL_000994 CIL_000994_0001 VISTA 1:217292780-217894009
CIL_00086S CIL_00086S_0001 VISTA 1:217734090-218335156
CIL_00086U CIL_00086U_0001 VISTA 1:217748935-218350744

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111388 Gm1821-001 processed_pseudogene Mus_musculus 0 294
ENSMUST00000122457 Gm8648-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000136938 Ubb-002 protein_coding Mus_musculus 0 270
ENSMUST00000019649 Ubb-001 protein_coding Mus_musculus 0 270
ENSMUST00000120012 Gm14516-001 processed_pseudogene Mus_musculus 2e-33 145

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