C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LAS1-like (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374807 LAS1L-004 ENSG00000001497 9606 - X:65512582-65534754 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000374807
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000374807 8.166±0.00 4.781±0.00 0.976±0.00 5.125±0.00 2.402±0.64 0.766±0.59 4.769±0.00 2.362±1.68 8.974±4.73 12.010±2.91 5.106±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SP CIL_0001SP_0002 CGP X:65366638-65534775
CIL_0003JT CIL_0003JT_0002 CGP X:65512582-65741931

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005815 IDA microtubule organizing center
GO:0006364 IEA rRNA processing
GO:0016020 IDA membrane
GO:0044822 IDA poly(A) RNA binding
GO:0071339 IDA MLL1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079987 Las1l-001 protein_coding Mus_musculus 0 1286
ENSMUST00000113864 Las1l-007 protein_coding Mus_musculus 0 749
ENSMUST00000126605 Las1l-002 retained_intron Mus_musculus 0 647
ENSMUST00000137659 Las1l-005 processed_transcript Mus_musculus 0 544
ENSMUST00000152181 Las1l-006 processed_transcript Mus_musculus 0 538
ENSMUST00000139717 Las1l-003 retained_intron Mus_musculus 0 366
ENSMUST00000147994 Las1l-004 processed_transcript Mus_musculus 0 344

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