C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich adaptor protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371980 LURAP1-001 ENSG00000171357 9606 + 1:46203334-46221261 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonLiverOvaryTestisENST00000371980
Transcript ID Adipose Bladder Breast Colon Liver Ovary Testis
ENST00000371980 1.370±0.00 1.542±0.00 0.904±0.00 1.811±1.04 2.036±0.00 3.486±0.00 7.546±1.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001N5 CIL_0001N5_0001 CGP 1:46188682-46221261

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001819 IDA positive regulation of cytokine production
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0016477 IEA cell migration
GO:0031032 IEA actomyosin structure organization
GO:0042641 IEA actomyosin
GO:0043123 IDA positive regulation of I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030469 Lurap1-001 protein_coding Mus_musculus 0 915
ENSMUST00000136855 Pomgnt1-008 retained_intron Mus_musculus 0 531
ENSMUST00000120083 Pomgnt1-011 protein_coding Mus_musculus 0 531
ENSMUST00000135982 Lurap1-002 processed_transcript Mus_musculus 0 374
ENSMUST00000144311 Pomgnt1-009 processed_transcript Mus_musculus 1.99965e-42 178
ENSMUST00000121052 Pomgnt1-010 protein_coding Mus_musculus 2e-23 115

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