C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 78
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371026 WDR78-001 ENSG00000152763 9606 - 1:66812885-66924887 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000371026
Transcript ID Bladder Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000371026 0.273±0.00 0.055±0.00 0.080±0.00 0.160±0.00 0.475±0.00 0.884±0.39 0.754±0.62 0.208±0.07 6.797±4.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000260 CIL_000260_0001 CGP 1:66797741-66924887
CIL_000261 CIL_000261_0001 CGP 1:66812885-66988619

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106868 Wdr78-005 protein_coding Mus_musculus 0 1738
ENSMUST00000036451 Wdr78-201 protein_coding Mus_musculus 0 1116
ENSMUST00000116316 Wdr78-001 nonsense_mediated_decay Mus_musculus 0 1116
ENSMUST00000136355 Wdr78-002 retained_intron Mus_musculus 0 881
ENSMUST00000036557 Wdr78-202 protein_coding Mus_musculus 0 721
ENSMUST00000138960 Wdr78-003 retained_intron Mus_musculus 0 494

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