C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulating synaptic membrane exocytosis 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370419 RIMS1-001 ENSG00000079841 9606 + 6:71886703-72264004 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLiverOvaryPlacentaENST00000370419
Transcript ID Adipose Adrenal Colon Kidney Liver Ovary Placenta
ENST00000370419 0.008±0.00 0.023±0.00 0.017±0.00 0.010±0.00 0.004±0.00 0.003±0.00 0.008±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097808 Rims1-001 protein_coding Mus_musculus 0 2278
ENSMUST00000097809 Rims1-202 protein_coding Mus_musculus 0 1142
ENSMUST00000097810 Rims1-203 protein_coding Mus_musculus 0 1142
ENSMUST00000097811 Rims1-204 protein_coding Mus_musculus 0 1142
ENSMUST00000081544 Rims1-201 protein_coding Mus_musculus 0 1142
ENSMUST00000115273 Rims1-205 protein_coding Mus_musculus 0 1142
ENSMUST00000185942 Rims1-002 protein_coding Mus_musculus 0 540
ENSMUST00000120746 Ncald-002 protein_coding Mus_musculus 0.00006 55
ENSMUST00000119730 Ncald-003 protein_coding Mus_musculus 0.00006 55
ENSMUST00000132423 Ncald-011 processed_transcript Mus_musculus 0.00001 55

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