C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SRSF protein kinase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370101 SRPK3-006 ENSG00000184343 9606 + X:153781041-153785728 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartMuscleOvaryENST00000370101
Transcript ID Breast Heart Muscle Ovary
ENST00000370101 0.774±0.00 3.872±3.57 9.742±3.91 0.170±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GI CIL_0007GI_0002 CGP X:153724868-153779346
CIL_0007GB CIL_0007GB_0002 CGP X:153764196-153785732
CIL_0001UV CIL_0001UV_0001 CGP X:153776412-153794523

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0006468 IEA protein phosphorylation
GO:0007519 IEA skeletal muscle tissue development
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0030154 IEA cell differentiation
GO:0060537 ISS muscle tissue development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002081 Srpk3-001 protein_coding Mus_musculus 0 1838
ENSMUST00000136664 Srpk3-002 retained_intron Mus_musculus 0 675
ENSMUST00000139630 Srpk3-004 retained_intron Mus_musculus 0 436
ENSDART00000021614 SRPK2-201 protein_coding Danio_rerio 0 342
ENSDART00000155033 SRPK2-001 protein_coding Danio_rerio 0 342
ENSDART00000042972 srpk1b-001 protein_coding Danio_rerio 0 233
ENSMUST00000137045 Srpk3-003 retained_intron Mus_musculus 2e-18 99

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