C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenosylmethionine decarboxylase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368877 AMD1-005 ENSG00000123505 9606 + 6:110874785-110893982 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverMuscleOvaryENST00000368877
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary
ENST00000368877 4.983±0.00 8.089±0.00 5.324±0.00 3.654±0.00 4.321±0.00 1.291±0.00 3.621±0.00 2.018±0.26 11.427±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OV CIL_0001OV_0002 CGP 6:110609978-110895713

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004014 IEA adenosylmethionine decarboxylase activity
GO:0006597 IEA spermine biosynthetic process
GO:0008295 IEA spermidine biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099945 Amd1-201 protein_coding Mus_musculus 0 1808
ENSMUST00000080898 Amd2-201 protein_coding Mus_musculus 0 1808
ENSMUST00000072796 Amd-ps3-201 processed_pseudogene Mus_musculus 0 1550
ENSMUST00000118392 Amd-ps4-001 processed_pseudogene Mus_musculus 0 1351
ENSMUST00000120127 Amd-ps1-001 processed_pseudogene Mus_musculus 0 1256
ENSDART00000064391 amd1-201 protein_coding Danio_rerio 0 551
ENSDART00000135919 amd1-001 protein_coding Danio_rerio 0 551

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