C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 50 (sugar efflux transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368401 SLC50A1-002 ENSG00000169241 9606 + 1:155135858-155138851 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartLiverLungOvaryPlacentaTestisENST00000368401
Transcript ID Adrenal Colon Heart Liver Lung Ovary Placenta Testis
ENST00000368401 5.115±0.00 2.550±0.00 1.617±0.00 4.650±0.00 5.951±0.00 8.222±0.00 6.322±1.26 4.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LP CIL_0000LP_0002 CGP 1:155127460-155138857

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IC nucleus
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006310 IEA DNA recombination
GO:0008643 IEA carbohydrate transport
GO:0012505 ISS endomembrane system
GO:0016021 IEA integral component of membrane
GO:0042946 IDA glucoside transport
GO:0042947 IDA glucoside transmembrane transporter activity
GO:0045815 ISS positive regulation of gene expression, epigenetic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185119 Slc50a1-007 nonsense_mediated_decay Mus_musculus 0 527
ENSMUST00000148095 Slc50a1-004 retained_intron Mus_musculus 0 381
ENSMUST00000144777 Slc50a1-005 retained_intron Mus_musculus 0 381
ENSMUST00000029565 Slc50a1-001 protein_coding Mus_musculus 0 381
ENSMUST00000133575 Slc50a1-003 retained_intron Mus_musculus 0 381
ENSMUST00000132445 Slc50a1-002 retained_intron Mus_musculus 0 381
ENSMUST00000130230 Slc50a1-008 protein_coding Mus_musculus 7e-40 169
ENSMUST00000130690 Slc50a1-009 processed_transcript Mus_musculus 0.000000000000002 88
ENSMUST00000055984 Isg20l2-001 protein_coding Mus_musculus 0.000002 58

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