C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367321 MTHFD1L-003 ENSG00000120254 9606 + 6:150865549-151101887 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyOvaryPlacentaTestisENST00000367321
Transcript ID Adipose Brain Breast Colon Kidney Ovary Placenta Testis
ENST00000367321 0.876±0.00 2.137±0.00 1.527±0.93 3.032±0.00 0.625±0.00 6.482±3.08 2.343±0.00 1.570±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ED CIL_0005ED_0001 CGP 6:150599863-151101887
CIL_0005EE CIL_0005EE_0001 CGP 6:150865549-151358557

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004329 IEA:IDA formate-tetrahydrofolate ligase activity
GO:0004488 IEA methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0005524 IEA:IDA ATP binding
GO:0005739 IDA mitochondrion
GO:0006730 IBA one-carbon metabolic process
GO:0006760 IDA folic acid-containing compound metabolic process
GO:0009396 IEA folic acid-containing compound biosynthetic process
GO:0015942 IDA formate metabolic process
GO:0016020 IDA membrane
GO:0035999 IEA tetrahydrofolate interconversion
GO:0042803 IDA protein homodimerization activity
GO:0046653 IDA tetrahydrofolate metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043735 Mthfd1l-002 protein_coding Mus_musculus 0 2992
ENSMUST00000120585 Mthfd1l-003 protein_coding Mus_musculus 0 2859
ENSMUST00000117291 Mthfd1l-001 protein_coding Mus_musculus 0 2859
ENSMUST00000154517 Mthfd1l-004 processed_transcript Mus_musculus 0 586

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