C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, catalytic subunit, beta isozyme
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358506 PPP1CB-201 ENSG00000213639 9606 + 2:28751748-28802930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverLungOvaryPlacentaENST00000358506
Transcript ID Brain Kidney Liver Lung Ovary Placenta
ENST00000358506 9.199±0.00 5.505±0.50 3.302±0.00 10.245±0.00 22.782±0.00 6.443±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013Q CIL_00013Q_0001 CGP 2:28457145-28802940

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005925 IDA focal adhesion
GO:0005977 IEA glycogen metabolic process
GO:0006470 ISS protein dephosphorylation
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0016787 IEA hydrolase activity
GO:0016791 ISS phosphatase activity
GO:0017018 ISS myosin phosphatase activity
GO:0019433 TAS triglyceride catabolic process
GO:0019901 IPI protein kinase binding
GO:0030155 IDA regulation of cell adhesion
GO:0030512 TAS negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032922 ISS circadian regulation of gene expression
GO:0042752 IMP regulation of circadian rhythm
GO:0043153 ISS entrainment of circadian clock by photoperiod
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0050115 IDA myosin-light-chain-phosphatase activity
GO:0051301 IEA cell division
GO:0070062 IDA extracellular vesicular exosome
GO:0070688 IDA MLL5-L complex
GO:0072357 IDA PTW/PP1 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015100 Ppp1cb-001 protein_coding Mus_musculus 0 2756
ENSMUST00000131300 Ppp1cb-002 nonsense_mediated_decay Mus_musculus 0 1796
ENSMUST00000133568 Ppp1cb-003 processed_transcript Mus_musculus 0 667
ENSMUST00000180575 PPP1CA-201 protein_coding Mus_musculus 0 496
ENSMUST00000046094 Ppp1ca-201 protein_coding Mus_musculus 0 496

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