C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rabaptin, RAB GTPase binding effector protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358201 RABEP2-001 ENSG00000177548 9606 - 16:28904421-28925752 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungOvaryPlacentaENST00000358201
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000358201 2.516±0.00 0.633±0.00 1.188±0.41 3.144±0.00 1.920±1.77 6.165±0.00 0.390±0.00 2.125±0.63 4.898±3.05 3.685±2.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005768 IEA endosome
GO:0006897 IEA endocytosis
GO:0008083 IEA growth factor activity
GO:0015031 IEA protein transport
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106405 Rabep2-003 protein_coding Mus_musculus 0 1578
ENSMUST00000106407 Rabep2-001 protein_coding Mus_musculus 0 1578
ENSMUST00000151304 Rabep2-002 retained_intron Mus_musculus 0 1336
ENSMUST00000148536 Rabep2-008 processed_transcript Mus_musculus 0 457
ENSMUST00000150933 Rabep2-005 nonsense_mediated_decay Mus_musculus 0 411
ENSMUST00000141764 Rabep2-006 retained_intron Mus_musculus 0 411
ENSMUST00000150530 Rabep2-004 nonsense_mediated_decay Mus_musculus 0 228

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