C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356464 RPS26-001 ENSG00000197728 9606 + 12:56041853-56044675 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356464
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356464 1.673±0.00 13.726±0.00 3.025±0.00 2.273±0.00 10.005±0.00 2.601±0.00 2.456±0.00 3.955±2.89 79.907±70.37 16.525±11.53 15.829±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003729 IDA mRNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 IC:IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0015935 IDA small ribosomal subunit
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022627 IDA cytosolic small ribosomal subunit
GO:0033119 IDA negative regulation of RNA splicing
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048099 Tmem194-001 protein_coding Mus_musculus 0.00002 55

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