C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: misshapen-like kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355280 MINK1-001 ENSG00000141503 9606 + 17:4833388-4898053 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000355280
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000355280 10.633±0.00 9.812±0.00 7.394±3.65 2.160±0.00 9.125±0.00 4.311±0.00 12.358±0.00 13.567±8.38 15.542±2.26 5.266±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RG CIL_0001RG_0001 CGP 17:4807096-4898061
CIL_0001R8 CIL_0001R8_0001 CGP 17:4833388-4903074

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001952 IMP regulation of cell-matrix adhesion
GO:0004672 TAS:IEA protein kinase activity
GO:0004674 IDA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005083 IEA small GTPase regulator activity
GO:0005515 IPI protein binding
GO:0005524 ISS:IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005829 TAS cytosol
GO:0006468 ISS:IEA protein phosphorylation
GO:0006950 ISS response to stress
GO:0007254 TAS JNK cascade
GO:0007268 ISS synaptic transmission
GO:0007275 ISS multicellular organismal development
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0022407 IMP regulation of cell-cell adhesion
GO:0030054 IEA cell junction
GO:0030334 IMP regulation of cell migration
GO:0031532 IMP actin cytoskeleton reorganization
GO:0035556 ISS intracellular signal transduction
GO:0042995 IEA cell projection
GO:0045060 IEA negative thymic T cell selection
GO:0045211 IEA postsynaptic membrane
GO:0046330 IMP positive regulation of JNK cascade
GO:0046777 IDA protein autophosphorylation
GO:0048813 ISS dendrite morphogenesis
GO:0050790 IEA regulation of catalytic activity
GO:0070062 IDA extracellular vesicular exosome
GO:2000311 ISS regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072237 Mink1-201 protein_coding Mus_musculus 0 6061
ENSMUST00000079244 Mink1-003 protein_coding Mus_musculus 0 6011
ENSMUST00000072873 Mink1-006 protein_coding Mus_musculus 0 5945
ENSMUST00000136663 Mink1-004 protein_coding Mus_musculus 0 5321
ENSMUST00000102559 Mink1-007 protein_coding Mus_musculus 0 2963
ENSMUST00000102558 Mink1-005 protein_coding Mus_musculus 0 2809
ENSMUST00000133310 Mink1-002 processed_transcript Mus_musculus 0 809
ENSMUST00000163854 Map4k4-201 protein_coding Mus_musculus 0 763
ENSMUST00000168431 Map4k4-202 protein_coding Mus_musculus 0 763
ENSDART00000131488 MAP4K4-201 protein_coding Danio_rerio 0 747
ENSDART00000051234 tnika-001 protein_coding Danio_rerio 0 654
ENSMUST00000153503 Mink1-011 retained_intron Mus_musculus 0 553
ENSMUST00000178764 Mink1-013 protein_coding Mus_musculus 0 472
ENSMUST00000132208 Mink1-008 retained_intron Mus_musculus 0 444
ENSMUST00000142650 Mink1-009 retained_intron Mus_musculus 0 444
ENSMUST00000152857 Mink1-010 retained_intron Mus_musculus 0 375
ENSMUST00000149845 Mink1-001 nonsense_mediated_decay Mus_musculus 0 322

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