C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAP domain containing ribonucleoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336133 SARNP-002 ENSG00000205323 9606 - 12:55757274-55817756 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336133
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336133 43.887±0.00 36.875±0.00 20.326±13.42 30.545±0.00 33.116±0.00 10.858±7.55 22.278±19.55 14.434±0.00 17.992±9.95 12.299±6.82 59.157±35.10 42.837±20.03 91.419±9.60

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000346 IDA transcription export complex
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006406 IDA mRNA export from nucleus
GO:0006417 IEA regulation of translation
GO:0016607 IDA nuclear speck
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105230 Sarnp-201 protein_coding Mus_musculus 0 896
ENSMUST00000056396 Gm6563-201 protein_coding Mus_musculus 0 867

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