C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330398 ATP6V0C-001 ENSG00000185883 9606 + 16:2513870-2520218 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverMuscleOvaryPlacentaENST00000330398
Transcript ID Brain Colon Kidney Liver Muscle Ovary Placenta
ENST00000330398 9.109±0.00 25.278±23.02 51.640±0.00 4.162±0.00 29.163±28.01 69.143±66.69 102.010±22.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000299 CIL_000299_0002 CGP 16:2496032-2520223

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005765 IDA lysosomal membrane
GO:0005925 IDA focal adhesion
GO:0006879 TAS cellular iron ion homeostasis
GO:0008286 TAS insulin receptor signaling pathway
GO:0010008 TAS endosome membrane
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0015992 TAS proton transport
GO:0016021 IEA integral component of membrane
GO:0016032 IEA viral process
GO:0030177 IMP positive regulation of Wnt signaling pathway
GO:0030670 TAS phagocytic vesicle membrane
GO:0031625 IPI ubiquitin protein ligase binding
GO:0033177 IEA proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain
GO:0033572 TAS transferrin transport
GO:0046933 TAS proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 TAS proton-transporting ATPase activity, rotational mechanism
GO:0051701 TAS interaction with host
GO:0055085 TAS transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:0090382 TAS phagosome maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024932 Atp6v0c-001 protein_coding Mus_musculus 0 782
ENSMUST00000098862 Atp6v0c-003 protein_coding Mus_musculus 0 737
ENSMUST00000151061 Atp6v0c-002 processed_transcript Mus_musculus 0 656
ENSMUST00000122373 Gm15487-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000148541 Atp6v0c-004 protein_coding Mus_musculus 0 505
ENSMUST00000156061 Atp6v0c-006 processed_transcript Mus_musculus 0 285
ENSMUST00000150647 Atp6v0c-005 protein_coding Mus_musculus 0 281

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