C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PARP1 binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000327680 PARPBP-001 ENSG00000185480 9606 + 12:102120245-102197520 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLungOvaryPlacentaTestisENST00000327680
Transcript ID Adrenal Breast Kidney Lung Ovary Placenta Testis
ENST00000327680 0.141±0.00 0.149±0.00 0.017±0.00 0.166±0.00 0.641±0.13 0.465±0.29 0.708±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006281 IEA DNA repair
GO:2000042 IMP negative regulation of double-strand break repair via homologous recombination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048518 Parpbp-001 protein_coding Mus_musculus 0 1129
ENSMUST00000164121 Parpbp-004 protein_coding Mus_musculus 0 453
ENSMUST00000168163 Parpbp-002 protein_coding Mus_musculus 0 436
ENSMUST00000164803 Parpbp-003 protein_coding Mus_musculus 0 377
ENSMUST00000048621 Pmch-001 protein_coding Mus_musculus 0 261

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