C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myelin expression factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000324324 MYEF2-001 ENSG00000104177 9606 - 15:48134631-48178517 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverMuscleOvaryENST00000324324
Transcript ID Brain Colon Heart Kidney Liver Muscle Ovary
ENST00000324324 1.088±0.00 0.244±0.03 0.157±0.02 0.709±0.00 0.273±0.00 0.017±0.00 0.073±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NB CIL_0004NB_0001 CGP 15:47184101-48142672
CIL_0004QO CIL_0004QO_0002 CGP 15:48120972-48178517
CIL_0004NI CIL_0004NI_0001 CGP 15:48134631-48203756

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152367 Myef2-001 protein_coding Mus_musculus 0 2375
ENSMUST00000142718 Myef2-005 protein_coding Mus_musculus 0 1760
ENSMUST00000061419 Gm9833-201 protein_coding Mus_musculus 0 1539
ENSMUST00000137091 Myef2-004 protein_coding Mus_musculus 0 1496
ENSMUST00000067780 Myef2-201 protein_coding Mus_musculus 0 1439
ENSMUST00000147105 Myef2-003 protein_coding Mus_musculus 0 1439
ENSMUST00000110501 Myef2-008 nonsense_mediated_decay Mus_musculus 0 1380
ENSMUST00000149911 Myef2-009 retained_intron Mus_musculus 0 1356
ENSMUST00000089825 Myef2-002 protein_coding Mus_musculus 0 1280
ENSMUST00000129945 Myef2-007 processed_transcript Mus_musculus 0 643
ENSMUST00000070353 Slc24a5-001 protein_coding Mus_musculus 0 425
ENSDART00000082506 myef2-201 protein_coding Danio_rerio 0 272
ENSDART00000082504 myef2-001 protein_coding Danio_rerio 0 272
ENSDART00000123823 myef2-202 protein_coding Danio_rerio 0 261
ENSDART00000142036 myef2-003 retained_intron Danio_rerio 3e-32 147
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000001 62
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00001 58

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