C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin light chain, phosphorylatable, fast skeletal muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000322861 MYLPF-001 ENSG00000180209 9606 + 16:30374777-30377991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverMuscleOvaryPlacentaTestisENST00000322861
Transcript ID Brain Breast Liver Muscle Ovary Placenta Testis
ENST00000322861 0.062±0.00 89.625±89.05 1.317±0.00 591.159±156.32 0.534±0.00 2.097±0.32 6.281±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V7 CIL_0003V7_0002 CGP 16:30357102-30377991

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005765 IDA lysosomal membrane
GO:0005859 TAS muscle myosin complex
GO:0006955 IEA immune response
GO:0007519 ISS skeletal muscle tissue development
GO:0008307 ISS structural constituent of muscle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032910 Mylpf-001 protein_coding Mus_musculus 0 697
ENSMUST00000139613 Mylpf-004 processed_transcript Mus_musculus 0 211

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