C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box L1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000320241 FOXL1-001 ENSG00000176678 9606 + 16:86578506-86582160 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000320241
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000320241 0.246±0.00 0.809±0.00 0.204±0.18 0.365±0.17 0.381±0.00 0.241±0.12 0.370±0.36 0.829±0.77 0.659±0.00 0.576±0.27 0.075±0.07 0.733±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008L5 CIL_0008L5_0001 VISTA 16:86096481-86697120
CIL_0008XN CIL_0008XN_0001 VISTA 16:86335014-86936242
CIL_00099Z CIL_00099Z_0001 VISTA 16:86565106-87168268
CIL_0002T4 CIL_0002T4_0001 CGP 16:86567251-86582160
CIL_0002T1 CIL_0002T1_0001 CGP 16:86576368-87317420

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 ISS:IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IC nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 NAS multicellular organismal development
GO:0007495 ISS visceral mesoderm-endoderm interaction involved in midgut development
GO:0007507 IMP heart development
GO:0008301 NAS DNA binding, bending
GO:0009887 ISS organ morphogenesis
GO:0030111 ISS regulation of Wnt signaling pathway
GO:0030166 ISS proteoglycan biosynthetic process
GO:0043565 IEA:IDA sequence-specific DNA binding
GO:0061146 IEA Peyer's patch morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000181609 Foxl1-001 protein_coding Mus_musculus 0 551
ENSMUST00000054691 Foxc2-001 protein_coding Mus_musculus 0 279
ENSDART00000018764 foxl1-001 protein_coding Danio_rerio 0 278
ENSMUST00000062292 Foxc1-001 protein_coding Mus_musculus 0 268

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