C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: choline dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000315251 CHDH-001 ENSG00000016391 9606 - 3:53812335-53846390 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000315251
Transcript ID Adrenal Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000315251 1.077±0.00 2.175±1.35 0.967±0.22 0.727±0.00 3.888±2.47 2.114±2.06 0.442±0.15 0.771±0.02 0.281±0.00 2.219±0.37

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006066 IEA alcohol metabolic process
GO:0008812 IEA choline dehydrogenase activity
GO:0016614 IEA oxidoreductase activity, acting on CH-OH group of donors
GO:0019285 IEA glycine betaine biosynthetic process from choline
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118917 Chdh-002 protein_coding Mus_musculus 0 1696
ENSMUST00000067620 Chdh-001 protein_coding Mus_musculus 0 1696
ENSMUST00000112250 Cacna1d-202 protein_coding Mus_musculus 1.99965e-42 180
ENSMUST00000112249 Cacna1d-201 protein_coding Mus_musculus 1.99965e-42 180
ENSMUST00000022142 Naip1-201 protein_coding Mus_musculus 0.0001 55

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