C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 166
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000312838 RNF166-001 ENSG00000158717 9606 - 16:88696495-88706421 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312838
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312838 4.312±0.00 1.863±0.25 2.418±2.21 2.850±0.00 4.461±0.00 1.658±0.41 0.609±0.00 5.785±0.00 3.727±3.16 4.058±1.16 2.759±1.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000575 CIL_000575_0002 CGP 16:88677682-88706421
CIL_00091T CIL_00091T_0001 VISTA 16:88690989-89294615
CIL_0000Y8 CIL_0000Y8_0002 CGP 16:88696495-88715386

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000014614 Rnf166-001 protein_coding Mus_musculus 0 1005
ENSMUST00000148780 Rnf166-002 processed_transcript Mus_musculus 0 603
ENSMUST00000136356 Rnf166-003 retained_intron Mus_musculus 0 250

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