C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PRELI domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000303204 PRELID1-001 ENSG00000169230 9606 + 5:177303774-177306959 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303204
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303204 10.340±0.00 55.097±0.00 3.513±0.00 9.923±5.23 12.494±8.13 18.460±14.03 4.138±2.92 22.165±16.67 17.473±15.79 15.182±11.01 5.169±0.00 22.749±9.96 60.418±23.82 25.887±5.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0001 VISTA 5:177089375-177692188

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005739 ISS mitochondrion
GO:0005758 IDA mitochondrial intermembrane space
GO:0006915 IEA apoptotic process
GO:0006955 TAS immune response
GO:0007275 TAS multicellular organismal development
GO:0010917 IDA negative regulation of mitochondrial membrane potential
GO:0010950 IDA positive regulation of endopeptidase activity
GO:0015914 IMP phospholipid transport
GO:0043066 IDA negative regulation of apoptotic process
GO:0043234 IDA protein complex
GO:0045580 IDA regulation of T cell differentiation
GO:0051881 IDA regulation of mitochondrial membrane potential
GO:0070234 IDA positive regulation of T cell apoptotic process
GO:0090201 IDA negative regulation of release of cytochrome c from mitochondria
GO:0097035 IDA regulation of membrane lipid distribution
GO:1901857 IDA positive regulation of cellular respiration
GO:1990050 IMP phosphatidic acid transporter activity
GO:2001140 IDA positive regulation of phospholipid transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021942 Prelid1-201 protein_coding Mus_musculus 0 1007
ENSMUST00000120413 Gm11605-001 processed_pseudogene Mus_musculus 0 845
ENSMUST00000119004 Gm12565-001 processed_pseudogene Mus_musculus 0 828
ENSMUST00000119264 Gm11352-001 processed_pseudogene Mus_musculus 0 243

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